Insertion junction: CLIP2.010816_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010816
Chromosome:chromosome 12
Location:1472523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488150 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCATCCGAACAGGCGCCTGAATCACTGCAGCCCCCCGGGTCCGCTT
Internal bar code:AGACGTTATCATGCATTATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:987
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGGGCAACGTCGCATAC
Suggested primer 2:CGTACGGCCCGTCATAAAGA