Insertion junction: CLIP2.010816_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010816
Chromosome:chromosome 12
Location:5555006
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530850 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACTGAACTCGGGGCTCCACCCGGCGGGCTGTCCTTACGCGCACGCG
Internal bar code:AGGGGGTTGGAGATACGCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1938
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTGATCGTCCATGAACT
Suggested primer 2:CCAACCATGCCAGCTACTGA