Insertion junction: CLIP2.010818_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010818
Chromosome:chromosome 9
Location:4607365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401589 (1 of 2) IPR000104//IPR002893//IPR003072 - Antifreeze protein, type I // Zinc finger, MYND-type // Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGGTATGGGCGCTGCAGGCCGCGTGCCTGGGCTCTGAAGCTGCAAAG
Internal bar code:ACCTTATGAGTCGGCCTCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3847
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGACATGTGGGATGCCT
Suggested primer 2:CGTGTCTGGGCGATACTCTC