Insertion junction: CLIP2.010827_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010827
Chromosome:chromosome 6
Location:2624182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270100 SBE2a,SBE2 (1 of 3) 2.4.1.18 - 1,4-alpha-glucan branching enzyme / Glycogen branching enzyme; Starch Branching Enzyme 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGAACCAGGGTAGGGACTGAAGGGGTGGGAATGGTACCGCACGGCAG
Internal bar code:CCAGAAGCTAAATCCTAATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:432
LEAP-Seq percent confirming:19.5122
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGTACGGATGGGTTAG
Suggested primer 2:GCTGTGGTGGCAAAGGATTG