Insertion junction: CLIP2.010841_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010841
Chromosome:chromosome 7
Location:4424123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343200 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGGAAGAGGTCTTCTTTCTCTTTCCGGCTGCACGGAAGGTTTCAGG
Internal bar code:CTCCTTTCCTGAGATCATAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:353
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTGGTGATTGCGCTTG
Suggested primer 2:TTTGATGTCCACACCTCCGG