Insertion junction: CLIP2.010842_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010842
Chromosome:chromosome 3
Location:6711749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195900 (1 of 7) PTHR11584//PTHR11584:SF381 - SERINE/THREONINE PROTEIN KINASE // PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATACAGTGGTTCCGACCCAGCACTGGCAAAGCTCGCAGAAACGCTGG
Internal bar code:TGGATCTTTCTACAGTCTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3149
LEAP-Seq percent confirming:52.1368
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTACGAGTCTATGCCAC
Suggested primer 2:CCATAGTGCCGTGGTACAGG