Insertion junction: CLIP2.010854_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010854
Chromosome:chromosome 3
Location:5496523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184700 (1 of 1) PTHR31810//PTHR31810:SF6 - FAMILY NOT NAMED // METACASPASE-4-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCCCCGATGCAAGCGTTCGAGGGGGTGTACAGGGCGTTGGGGGTAAA
Internal bar code:TTGGACGAAATTCTGCCGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1282
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCCAGACATGTCACTGC
Suggested primer 2:GGCAAGAAGGCTGTCCTCAT