Insertion junction: CLIP2.010867_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010867
Chromosome:chromosome 4
Location:1971082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218900 (1 of 2) PTHR10887//PTHR10887:SF333//PTHR13779//PTHR13779:SF20 - DNA2/NAM7 HELICASE FAMILY // SUBFAMILY NOT NAMED // HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTGGCTGAGAACCTACCACAGCCTTGCAGTTACAGCCGGACAGCAAT
Internal bar code:GGTCGAAGAGCGGAAAGATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5694
LEAP-Seq percent confirming:97.9381
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGCCACCTCGTACTGGT
Suggested primer 2:TACGAGGACACTGAGCAGGA