Insertion junction: CLIP2.010868_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010868
Chromosome:chromosome 5
Location:159810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242550 RSP6,PF26 Radial spoke protein 6; (1 of 2) PF04712 - Radial spokehead-like protein (Radial_spoke) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGCTGCAGCTGCGGCAGCTGCCGTGGCGAAGGCGAGCCTATTCGGGT
Internal bar code:CCGCTTTGATGGACCTGAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1226
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTACTCTCTCATCGCCC
Suggested primer 2:AGATGCCACGTACAAGCACA