Insertion junction: CLIP2.010875_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010875
Chromosome:chromosome 10
Location:6569373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465650 (1 of 2) IPR001680//IPR011047//IPR017986//IPR020472//IPR027417 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGACGCCCGGCGGCAGGTGCGGCGCGGCGCCTAGGGGCCCCATGTGC
Internal bar code:GAAAGCCTGCAGGTATCGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCACCTTGTTGTCAAGCG
Suggested primer 2:ATTCACAAGGTGCGGCAAAC