Insertion junction: CLIP2.010876_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010876
Chromosome:chromosome 13
Location:2445710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACGGCTGCGCTGTACGGCACATCCACCCAGCACCCCCACCACTGCGC
Internal bar code:TTGTAAGGCGGGTTGCGACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:673
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAGATACAGGTGCGGGG
Suggested primer 2:GATTAAGGTGGGTGGGTGGG