Insertion junction: CLIP2.010888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010888
Chromosome:chromosome 4
Location:3508858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228000 (1 of 1) PF13890 - Rab3 GTPase-activating protein catalytic subunit (Rab3-GTPase_cat) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGAACCGATCACAAGTAAGCGACAGCGAGTACGGCGAGTCAAAGGC
Internal bar code:TTTATAGGATATAAGGGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1193
LEAP-Seq percent confirming:63.4615
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGCACAAGTTAGGCAAC
Suggested primer 2:GGGGATGGAATGACTCGCAA