Insertion junction: CLIP2.010900_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010900
Chromosome:chromosome 8
Location:4073379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383000 (1 of 1) IPR000104//IPR001471//IPR016177//IPR031112 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGTAGCCTCTTCCTCCACGACTTACCAGTCATCACGCACTCTGAA
Internal bar code:GGCCAGTGCGTTAAACCTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1760
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTCTTCATCAACTGCAG
Suggested primer 2:AACCCGTAGTTGCTAGTGCC