Insertion junction: CLIP2.010902_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010902
Chromosome:chromosome 9
Location:3722443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397327 (1 of 1) PTHR11139:SF68 - DNA-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGAACTTGCGGTCACAGTTGGCCTCAACCTCCCCAACCTCTCCGCA
Internal bar code:TTTTTTGGGACGATATACCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:12.1951
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTAGTTATGCCTACGCCA
Suggested primer 2:GCAATCCCTCGACACTCCAA