Insertion junction: CLIP2.010905_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010905
Chromosome:chromosome 2
Location:8478490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142000 CrUbcE2_1,CrUbc9,CreSCE1a,CrSCE1,UBC4,SCE1 (1 of 1) PTHR24067//PTHR24067:SF153 - UBIQUITIN-CONJUGATING ENZYME E2 // SUBFAMILY NOT NAMED; SUMO-conjugating enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGGCTGCGCTTCCCCGCTTACCCGTCGTCTGCGGTTTCTGGTCGAGC
Internal bar code:TTTTCACATCATACCCACTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1140
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCACATCTTTGGCTGG
Suggested primer 2:CCTTTCCAACAATTGCCCCG