Insertion junction: CLIP2.010909_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010909
Chromosome:chromosome 11
Location:564676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467604 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCCGCCAAGGCAGCCGCCGCCGCCATTGCGGCGCAGCTGGCGGCGGC
Internal bar code:GGGAGCCTGACTCGTTGTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1390
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGAAACAGCGTGCCAAGG
Suggested primer 2:GAGCTGGAGTACAAGCACGT