Insertion junction: CLIP2.010911_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010911
Chromosome:chromosome 12
Location:6457186
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g537500 (1 of 1) PTHR11200//PTHR11200:SF136 - INOSITOL 5-PHOSPHATASE // PHOSPHOINOSITIDE PHOSPHATASE SAC1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCTCCTGCTGCTGCTCCTTGTGCTGCTGCTCCTGCTACAGCCGGGCG
Internal bar code:GGTGTGACATAAATAGTCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:65.625
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACGGCACAAACTAGTGG
Suggested primer 2:AAAAGGGTGTGTCAGTGGGG