Insertion junction: CLIP2.010928_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010928
Chromosome:chromosome 4
Location:1711163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212250 (1 of 82) IPR020846 - Major facilitator superfamily domain; GT77 family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCTAACGGCTAACGCCCTGGGTCTCGCTGTATAAATACATACACAC
Internal bar code:TCATGTACTGGTTGGGTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1078
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCTGGACTTTGCGGAGA
Suggested primer 2:GGGGATAGCCATTCATGCGA