Insertion junction: CLIP2.010932_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010932
Chromosome:chromosome 2
Location:3293773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097550 (1 of 1) PTHR12532:SF0 - TRANSCRIPTIONAL REGULATORY PROTEIN HAH1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACAAACGTTAGGCAGCGCTACCCGTCTAGTGACCACCCCAAACCC
Internal bar code:TTATAGTATAGTTGTACGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:559
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACGTATGTGGCTCTGGG
Suggested primer 2:CACACACACTGCGAACACTG