Insertion junction: CLIP2.010937_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010937
Chromosome:chromosome 9
Location:802958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403850 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGAGCCGGCCTGTCCGCCCTCGCCTCCGCAGCAGTCCAGGTCGCTAC
Internal bar code:GTTGCTTCAGCTGTATTGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2452
LEAP-Seq percent confirming:95.3125
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTTGAACCCGACAGGCC
Suggested primer 2:GTTGTCAACGCCCTCTCTGA