Insertion junction: CLIP2.010937_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010937
Chromosome:chromosome 9
Location:802961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403850 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCCGCTGCCCTGTGTGGATGTCTGCCCGGGTAAGCAGCGAGTTGAC
Internal bar code:GTTGCTTCAGCTGTATTGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3624
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTCAACGCCCTCTCTGA
Suggested primer 2:TTACTTGAACCCGACAGGCC