Insertion junction: CLIP2.010938_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010938
Chromosome:chromosome 9
Location:5754883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410800 NRT2B,NAR4 (1 of 4) K02575 - MFS transporter, NNP family, nitrate/nitrite transporter (NRT, narK, nrtP, nasA); High affinity nitrate transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATTAAGTAGCTTGCCCCGTCGTCCGCGTGCCCCGCCCTCCGTCACGG
Internal bar code:TATTTGGACCAGTTTTTGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3623
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAGGAAAGCGGTGGATG
Suggested primer 2:GTGTGTTCCGCAAAAGGCAT