Insertion junction: CLIP2.010938_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010938
Chromosome:chromosome 9
Location:5754887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410800 NRT2B,NAR4 (1 of 4) K02575 - MFS transporter, NNP family, nitrate/nitrite transporter (NRT, narK, nrtP, nasA); High affinity nitrate transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCACTTGATCTGCCAGGTGGCGGTGCCAGAAAACCAGATCGCTTGCG
Internal bar code:GGGGCAAAGATCCGGGGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2400
LEAP-Seq percent confirming:52.7778
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTTCCGCAAAAGGCAT
Suggested primer 2:ACAGAGGAAAGCGGTGGATG