Insertion junction: CLIP2.010939_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010939
Chromosome:chromosome 3
Location:5040933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179941 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGAGTTATTACAGGGTGGGTGGTGGCGGTGCGGTGCAGGTGCCAGGAC
Internal bar code:GCGAGTCTCGGCAAGGATTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:482
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCATGGGGAAAGGAGGGG
Suggested primer 2:CCAGCTTCTGTTTGTTGGGC