Insertion junction: CLIP2.010953_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010953
Chromosome:chromosome 3
Location:3780021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169550 AOX2 Alternative oxidase; (1 of 2) PTHR31803:SF3 - ALTERNATIVE OXIDASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACACCCTACTGCAAGAGGCTGAGAACGAGCGCATGCACCTGTGAGTG
Internal bar code:GGCGGCCATTTAAGGTCTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3250
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAACGTCAGCCTGTACCG
Suggested primer 2:GGACCTTCGACAAGCTGACA