Insertion junction: CLIP2.010953_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010953
Chromosome:chromosome 17
Location:6902236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g747847 (1 of 2) IPR009675 - TPX2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTTAAGGCATTTACAGACTCGCATCCAAGCGGTAACTAGAGCCCCGC
Internal bar code:TGCGCGCCAGGTGTGAGATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:659
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCTTTCGTTTCCCTCA
Suggested primer 2:GTAGCAGGTGTGTGTCGTCA