Insertion junction: CLIP2.010958_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010958
Chromosome:chromosome 16
Location:3957912
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGACGGTCCGGACCTCCAAGCCATGAGACCCATGCGGTCAAGCCATG
Internal bar code:TCGTTTTGCTCGGCGTCCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1489
LEAP-Seq percent confirming:40.625
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCGACTGCACAGTTTTG
Suggested primer 2:GGCTGTTGACAAGTGTGCTG