Insertion junction: CLIP2.010959_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010959
Chromosome:chromosome 3
Location:3996396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171600 XPP1,XPP Exopolyphosphatase; (1 of 2) K03787 - 5'-nucleotidase (surE) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTACAAACCCGGCCACGGCCGTGGGCCACCACACACGCGCACACGCC
Internal bar code:CTTGACCTGTAGGGTCGTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:731
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTACCGCGACTCCTACG
Suggested primer 2:GGTAAGCCGTTCATGGGGAA