Insertion junction: CLIP2.010967_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010967
Chromosome:chromosome 14
Location:1170246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g615350 THB2 Truncated hemoglobin; (1 of 2) IPR016339 - Truncated hemoglobin, group 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTGCGGCTGCGCTGTGCATGCCCCTCGTCCTGGCGCCTGGTACTCGC
Internal bar code:TAACACCAAACCTATGTTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2009
LEAP-Seq percent confirming:84.375
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCATATGTCCAGCCCTCA
Suggested primer 2:ATGTCCATACCGACAGTCGC