Insertion junction: CLIP2.010972_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010972
Chromosome:chromosome 16
Location:1340669
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g651801 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCAACAGGCAACCGGCATGGCCGCAGCGGTCACAGCCGCAGCCAGG
Internal bar code:GCATCATAGGCGGGCCCACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:215
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGTATGAGTGACGTGGCC
Suggested primer 2:ACAGCAGTACCAGCACCATC