Insertion junction: CLIP2.010974_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010974
Chromosome:chromosome 2
Location:7986116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145100 FAP39 Flagellar Associated Protein 39; (1 of 1) PF00122//PF00689//PF00690//PF00702//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // haloacid dehalogenase-like hydrolase (Hydrolase) // haloacid dehalogenase-like hydrolase (HAD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGCCGAACCCCTGCCCTTACGCCCCCTTCCCGTCTTTCATGGACGGC
Internal bar code:TTTGTAATATGTGCCTAATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3968
LEAP-Seq percent confirming:98.6842
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGCGCGAGATTTGATTTC
Suggested primer 2:AGAAGGCCGGAATCACTGTG