Insertion junction: CLIP2.010998_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010998
Chromosome:chromosome 7
Location:2213579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327250 (1 of 3) IPR000104//IPR005135 - Antifreeze protein, type I // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGCGCCTGCGCCATCCTGGCCCAGACGCTGGGGCCCGAGTGGCGCGC
Internal bar code:CGATGTCTTCTGCTTTTTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGTACAGCAAGCCCTC
Suggested primer 2:TCCAGAGGCATTTGCGTGAT