Insertion junction: CLIP2.010999_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010999
Chromosome:chromosome 12
Location:9455555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540850 (1 of 1) IPR009031 - Carbohydrate binding module family 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTGGAACTAAGCAATTGGGTCAGCCGGCATGTGGTGGTAGCCTGGTA
Internal bar code:AACAAAATGCCTATTAGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5203
LEAP-Seq percent confirming:86.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATTGCACCCCTTAGCAT
Suggested primer 2:GCACAAGAGTGGGAGTCCTC