Insertion junction: CLIP2.011003_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011003
Chromosome:chromosome 6
Location:4191896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278237 CPLD34 Putative carbohydrate/purine kinase; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAATGGGTCCTCCTCTGATGCCCCCTGCTCCGCAGGCGCAGTGGCTGG
Internal bar code:TTCAACCAACATTTGCATTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:968
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCTGAGATGGCGGTGTT
Suggested primer 2:AGGGGGAAAGCTACTTTGGC