Insertion junction: CLIP2.011019_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011019
Chromosome:chromosome 13
Location:4735426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g604250 (1 of 1) IPR002889//IPR003882//IPR013994 - Carbohydrate-binding WSC // Pistil-specific extensin-like protein // Carbohydrate-binding WSC, subgroup intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATACATGCTGTATCTCACATGCTGTATACATGCGCTGTCCGTTGAGC
Internal bar code:AAACTAGTTGGCCTCGTGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3225
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGCCACAAACTTGGTCA
Suggested primer 2:GCCATCCGAACGTCAAATCG