Insertion junction: CLIP2.011026_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011026
Chromosome:chromosome 9
Location:2042068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396550 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGTCACGGAAAAAGCGCGCGCTTCCGACGAAGGTAGGGCTGCACAT
Internal bar code:CCGAGGGTGGAGACGATGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGCCTGCGACGAATAGT
Suggested primer 2:GCCGTCATGCCGTGTCTATA