Insertion junction: CLIP2.011028_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011028
Chromosome:chromosome 12
Location:5858631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533351 CLPB5 (1 of 3) K03695 - ATP-dependent Clp protease ATP-binding subunit ClpB (clpB); ClpB chaperone, Hsp100 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGTGTGTGTGTTGTTAAACGGTGAGATGTGTGGGTGTTTGCATGCAT
Internal bar code:GTAATTCGTTATCGACAAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTGCAAGGATGGATGGA
Suggested primer 2:GTGTGTGTGTGTACGTGTGC