Insertion junction: CLIP2.011029_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011029
Chromosome:chromosome 9
Location:1120178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401600 (1 of 1) IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGAATGTATGGTACTGTGCGTGTTCGCTTGCACGCAGACTTTGACCGC
Internal bar code:GAGACCAACGTGACCGAAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1961
LEAP-Seq percent confirming:88.4058
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCCGAAGCTGTCAGGATA
Suggested primer 2:TGGTGACGGTTGCTGAGATC