Insertion junction: CLIP2.011033_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011033
Chromosome:chromosome 2
Location:5521892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114750 CDKP6,CDPK6,CDPK4 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTACTCGTGTCGCAGGCAGGCGCCAGGCGAGTGCCGCGAGCTGCTGTC
Internal bar code:TTTATGACTATATGGGTTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1568
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCCGCGGCAAAATATTC
Suggested primer 2:AACACATGCTGCACTGCTTG