Insertion junction: CLIP2.011033_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011033
Chromosome:chromosome 2
Location:5521893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114750 CDKP6,CDPK6,CDPK4 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAAAGCCAACAACGCTTTTGCCAAACACAGATCATCGCCAACAGCCTG
Internal bar code:TTTATGACTATATGGGTTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3685
LEAP-Seq percent confirming:98.7805
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:AACACATGCTGCACTGCTTG
Suggested primer 2:GTCCCCGCGGCAAAATATTC