Insertion junction: CLIP2.011035_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011035
Chromosome:chromosome 14
Location:2129514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621751 USP,USP2,UAP2 (1 of 1) 2.7.7.64 - UTP-monosaccharide-1-phosphate uridylyltransferase / USP; Wide substrate-specificity UDP-sugar pyrophosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGGAACAGGTCGCGCTGATGCTTGCTTGGACGTACGGTAATGGAACA
Internal bar code:GGGTCTACAACATGGTCGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1675
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCATCCACGTGAACACA
Suggested primer 2:GCATCTCCACGGAGCTCTAC