Insertion junction: CLIP2.011044_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011044
Chromosome:chromosome 12
Location:9436193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541100 OTU7 (1 of 1) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED; OTU-like cysteine protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGGTGGGCTCCGGCGGGGCCCCCGGCATGCACTTCAACTCGCTGGTC
Internal bar code:GTCTGGTTCGACAAGGTCTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:833
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCATGCACATACACGCAC
Suggested primer 2:AAGGCGGTGATCCAAGTGAG