Insertion junction: CLIP2.011048_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011048
Chromosome:chromosome 10
Location:5261853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456400 DAT1 (1 of 1) PTHR11958//PTHR11958:SF63 - SODIUM/DICARBOXYLATE SYMPORTER-RELATED // EXCITATORY AMINO ACID TRANSPORTER 2, ISOFORM C; Dicarboxylate/amino acid cation sodium transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCATGCGCTGCGCCACCGAGGGGCTGGGCTGCGACCCGCGCATTGTGC
Internal bar code:GGTCGAGGTCTGCGTATCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2206
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCCGAGATCAGAACCCG
Suggested primer 2:CAAACGCCGCCCTGATTATG