Insertion junction: CLIP2.011060_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011060
Chromosome:chromosome 3
Location:454524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTTCACCCATTTCCCTGCCGCATGCTGACATCACGATTGCACGACAT
Internal bar code:TCACTCCTCATACGTTCAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1673
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGTGTTCCCCGGTCAT
Suggested primer 2:TGAGTTCTTTTGCGCAGTGC