Insertion junction: CLIP2.011060_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011060
Chromosome:chromosome 17
Location:6388468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802145 (1 of 8) PTHR23023:SF130 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCACCTGTTCCGCGGCCAGATGCTTCACGCCTACGACCTGCCGCCCGA
Internal bar code:TTTCGATCTTAGAGCGCGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:988
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCTGCTACTGCTACGC
Suggested primer 2:CGTTTACCCCTCACCCCTTC