Insertion junction: CLIP2.011068_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011068
Chromosome:chromosome 17
Location:3405667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723300 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCTGACCCCGCCCCACGTCACGTGTTCCATCACAGGCCGCTCCACA
Internal bar code:GCCCGAGGGGATAGCCAGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:894
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACGGAAATGACAGAGGG
Suggested primer 2:GGGTGTGGAACGATGAGGTT