Insertion junction: CLIP2.011070_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011070
Chromosome:chromosome 16
Location:2910411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663350 CLPX1,CLPX ClpX chaperone; (1 of 1) K03544 - ATP-dependent Clp protease ATP-binding subunit ClpX (clpX, CLPX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGGCTTCAAGCGCACCACACGCGGATGAGACCAGCCAAGACCGCAG
Internal bar code:GTAGGTGTATGCGATAAGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1165
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGCAGCAACACACACAG
Suggested primer 2:TGTTGCCGTTGATGTTGCTG