Insertion junction: CLIP2.011076_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011076
Chromosome:chromosome 3
Location:7512326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205400 (1 of 1) PF01344//PF07707 - Kelch motif (Kelch_1) // BTB And C-terminal Kelch (BACK) CDS
lncRNA_TCONS_00115950 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCGCTGTGTGCGGTTTGAGATTGAGAGGCAGGATCCGTGTCGGTGT
Internal bar code:TTTCCTTATCTTAGTTGCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1887
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATCCTTCAGCTGCCTTG
Suggested primer 2:TGCATTGAAGCCCATTCCCT