Insertion junction: CLIP2.011079_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011079
Chromosome:chromosome 17
Location:5936169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742050 (1 of 18) IPR011051 - RmlC-like cupin domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGCGTGTGGGCGCTTTGGGCTTGCACTTGGGCATTTGTAAATTCCC
Internal bar code:TAGGAATTAGAAATGAGGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3655
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAGGCCCGTCTAAGTCT
Suggested primer 2:GAGGAGGGAGGGAGGGAAAT