Insertion junction: CLIP2.011084_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011084
Chromosome:chromosome 12
Location:464313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801344 (1 of 5) PTHR19446:SF107 - INTRON MATURASE, TYPE II FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTGTCGACAGCAGCAGCAGCAGCTGTCTGCCATGCAGACATAGCCCT
Internal bar code:GATCGTTCAAACTTCGACCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4212
LEAP-Seq percent confirming:5.12821
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGTCATCCTCGGTTG
Suggested primer 2:ACATGGAGGCCTTCTGCTTC